Answer:
If you run Firebird 1.x which doesn't have EXECUTE BLOCK, you can run the following query:
select 'ALTER INDEX '||rdb$index_name ||' ACTIVE;'
from rdb$indices
where rdb$system_flag is not null and rdb$system_flag = 0
select 'ALTER INDEX '||rdb$index_name ||' ACTIVE;'
from rdb$indices
where rdb$system_flag is not null and rdb$system_flag = 0
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